Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2892 domain-containing protein | D5071_04710 | Not Available | Positive | 1003709 - 1004245 | 19220.7 |
| hypothetical protein | D5071_04715 | Not Available | Positive | 1004317 - 1004646 | 12533.7 |
| Trna-ser | Not Available | Not Available | Positive | 1005374 - 1005463 | Not Available |
| hypothetical protein | D5071_04725 | Not Available | Negative | 1005682 - 1006320 | 22568.0 |
| choline transporter | D5071_04730 | Not Available | Negative | 1006537 - 1008570 | 76091.4 |
| transcriptional regulator beti | D5071_04735 | Not Available | Positive | 1008923 - 1009510 | 21906.6 |
| betaine-aldehyde dehydrogenase | D5071_04740 | Not Available | Positive | 1009580 - 1011052 | 53082.4 |
| choline dehydrogenase | D5071_04745 | Not Available | Positive | 1011072 - 1012751 | 62218.0 |
| tellurite resistance terb family protein | D5071_04750 | Not Available | Positive | 1012898 - 1013551 | 23744.3 |
| bifunctional 3-hydroxydecanoyl-acp dehydratase/trans-2-decenoyl-acp isomerase | D5071_04755 | Not Available | Negative | 1013646 - 1014164 | 19000.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
