Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine endopeptidase | D5071_04480 | Not Available | Positive | 958851 - 959798 | 34630.9 |
| glutathione s-transferase family protein | D5071_04485 | Not Available | Negative | 959874 - 960560 | 25567.6 |
| beta-glucosidase bglx | D5071_04490 | Not Available | Positive | 960954 - 963260 | 84196.8 |
| isopentenyl-diphosphate delta-isomerase | D5071_04495 | Not Available | Positive | 963364 - 963903 | 20546.2 |
| lyse family translocator | D5071_04500 | Not Available | Negative | 964222 - 964869 | 23843.0 |
| arac family transcriptional regulator | D5071_04505 | Not Available | Negative | 964922 - 965767 | 32255.2 |
| atp-dependent dna helicase ding | D5071_04510 | Not Available | Positive | 965918 - 968017 | 79561.8 |
| hypothetical protein | D5071_04515 | Not Available | Positive | 968135 - 968323 | 7173.11 |
| serine 3-dehydrogenase | D5071_04520 | Not Available | Positive | 968563 - 969999 | 51453.5 |
| proteinase inhibitor | D5071_04525 | Not Available | Positive | 970105 - 970416 | 11245.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
