Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts lactose/cellobiose transporter subunit iia | D5071_04430 | Not Available | Positive | 947271 - 947588 | 11755.4 |
| hypothetical protein | D5071_04435 | Not Available | Negative | 947681 - 948352 | 26066.7 |
| trna dihydrouridine(16) synthase dusc | D5071_04440 | Not Available | Positive | 948561 - 949493 | 34683.9 |
| hypothetical protein | D5071_04445 | Not Available | Positive | 950003 - 953665 | 138598.0 |
| s-methylmethionine permease | D5071_04450 | Not Available | Positive | 953819 - 955231 | 51151.4 |
| homocysteine s-methyltransferase | D5071_04455 | Not Available | Positive | 955224 - 956171 | 33766.0 |
| hypothetical protein | D5071_04460 | Not Available | Positive | 956188 - 956736 | 20269.3 |
| class iv adenylate cyclase | D5071_04465 | Not Available | Positive | 957167 - 957709 | 21308.7 |
| fmn-binding protein | D5071_04470 | Not Available | Positive | 957770 - 958126 | 12393.0 |
| hypothetical protein | D5071_04475 | Not Available | Positive | 958191 - 958718 | 19573.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
