Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione abc transporter substrate-binding protein gsib | D5071_04370 | Not Available | Positive | 932352 - 933887 | 56442.9 |
| glutathione abc transporter permease gsic | D5071_04375 | Not Available | Positive | 933996 - 934916 | 34072.8 |
| glutathione abc transporter permease gsid | D5071_04380 | Not Available | Positive | 934926 - 935831 | 33089.4 |
| peptidase t | D5071_04390 | Not Available | Negative | 935982 - 937211 | 44887.2 |
| pts sugar transporter subunit iic | D5071_04400 | Not Available | Positive | 939370 - 940656 | 46466.2 |
| alpha-l-rhamnosidase | D5071_04405 | Not Available | Positive | 940719 - 943343 | 98454.4 |
| arac family transcriptional regulator | D5071_04410 | Not Available | Positive | 943383 - 944327 | 36895.7 |
| lactam utilization protein lamb | D5071_04415 | Not Available | Positive | 944522 - 945805 | 46874.9 |
| alpha/beta hydrolase | D5071_04420 | Not Available | Positive | 945848 - 946810 | 34527.9 |
| pts sugar transporter subunit iib | D5071_04425 | Not Available | Positive | 946914 - 947219 | 11191.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
