Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | D5071_04315 | Not Available | Negative | 921391 - 921789 | 14936.7 |
| lysozyme inhibitor lpri family protein | D5071_04320 | Not Available | Negative | 922409 - 922795 | 14297.3 |
| hypothetical protein | D5071_04325 | Not Available | Positive | 923038 - 923517 | 16915.8 |
| yqae/pmp3 family membrane protein | D5071_04335 | Not Available | Positive | 924125 - 924292 | 5979.69 |
| ggdef domain-containing protein | D5071_04340 | Not Available | Negative | 924374 - 925849 | 56452.4 |
| lipid kinase | D5071_04345 | Not Available | Positive | 926133 - 927041 | 32717.2 |
| nitroreductase family protein | D5071_04350 | Not Available | Negative | 927118 - 927717 | 22243.3 |
| molybdopterin-synthase adenylyltransferase moeb | D5071_04355 | Not Available | Negative | 927818 - 928576 | 27454.5 |
| molybdopterin molybdotransferase | D5071_04360 | Not Available | Negative | 928579 - 929814 | 43999.8 |
| dipeptide abc transporter atp-binding protein | D5071_04365 | Not Available | Positive | 930416 - 932317 | 70550.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
