Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murr/rpir family transcriptional regulator | D5071_04195 | Not Available | Negative | 891649 - 892611 | 35273.6 |
| aldose epimerase | D5071_04200 | Not Available | Negative | 892613 - 893494 | 33302.4 |
| sulfatase | D5071_04205 | Not Available | Negative | 893505 - 895265 | 67333.8 |
| pts glucose transporter subunit iib | D5071_04210 | Not Available | Negative | 895286 - 896827 | 55023.3 |
| anaerobic sulfatase maturase | D5071_04215 | Not Available | Positive | 897021 - 898238 | 46510.6 |
| cytochrome bd-i oxidase subunit cydx | D5071_04220 | Not Available | Negative | 898334 - 898438 | 3684.45 |
| cytochrome d ubiquinol oxidase subunit ii | D5071_04225 | Not Available | Negative | 898458 - 899597 | 42276.2 |
| cytochrome bd-i ubiquinol oxidase subunit cyda | D5071_04230 | Not Available | Negative | 899612 - 901189 | 58561.7 |
| tail fiber assembly protein | D5071_04235 | Not Available | Negative | 901738 - 902355 | 22973.8 |
| tail fiber protein | D5071_04240 | Not Available | Negative | 902355 - 903224 | 30723.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
