Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit m | D5071_04085 | Not Available | Positive | 864285 - 865820 | 56667.1 |
| nadh-quinone oxidoreductase subunit nuon | D5071_04090 | Not Available | Positive | 865827 - 867284 | 52308.6 |
| stress response protein elab | D5071_04095 | Not Available | Positive | 867544 - 867855 | 11325.6 |
| alpha,alpha-phosphotrehalase | D5071_04100 | Not Available | Negative | 867938 - 869629 | 65539.1 |
| pts trehalose transporter subunit iibc | D5071_04105 | Not Available | Negative | 869700 - 871124 | 51286.8 |
| hypothetical protein | D5071_04110 | Not Available | Positive | 871014 - 871208 | 7107.47 |
| phzf family phenazine biosynthesis protein | D5071_04120 | Not Available | Negative | 872029 - 872925 | 32349.6 |
| hypothetical protein | D5071_04130 | Not Available | Positive | 874995 - 880253 | 188007.0 |
| abc-f family atpase | D5071_04135 | Not Available | Positive | 880684 - 882276 | 59701.3 |
| heme anaerobic degradation radical sam methyltransferase chuw/hutw | D5071_04140 | Not Available | Positive | 882690 - 884003 | 49237.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
