Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit b | D5071_04035 | Not Available | Positive | 852561 - 853235 | 25607.8 |
| nadh-quinone oxidoreductase subunit c/d | D5071_04040 | Not Available | Positive | 853334 - 855133 | 68829.6 |
| nadh-quinone oxidoreductase subunit nuoe | D5071_04045 | Not Available | Positive | 855196 - 855681 | 17867.1 |
| nadh-quinone oxidoreductase subunit nuof | D5071_04050 | Not Available | Positive | 855678 - 857027 | 49319.3 |
| nadh-quinone oxidoreductase subunit nuog | D5071_04055 | Not Available | Positive | 857214 - 859940 | 99823.3 |
| nadh-quinone oxidoreductase subunit nuoh | D5071_04060 | Not Available | Positive | 859937 - 860911 | 35923.8 |
| nadh-quinone oxidoreductase subunit i | D5071_04065 | Not Available | Positive | 860929 - 861471 | 20360.5 |
| nadh-quinone oxidoreductase subunit j | D5071_04070 | Not Available | Positive | 861481 - 862041 | 19890.9 |
| nadh-quinone oxidoreductase subunit k | D5071_04075 | Not Available | Positive | 862038 - 862340 | 11000.0 |
| nadh-quinone oxidoreductase subunit l | D5071_04080 | Not Available | Positive | 862337 - 864184 | 66664.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
