Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | D5071_03875 | Not Available | Positive | 822105 - 823115 | 35728.2 |
| trna pseudouridine(38-40) synthase trua | D5071_03880 | Not Available | Positive | 823115 - 823966 | 31656.6 |
| deda family protein | D5071_03885 | Not Available | Positive | 824177 - 824839 | 24536.6 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | D5071_03895 | Not Available | Positive | 825064 - 825981 | 33606.8 |
| bifunctional tetrahydrofolate synthase/dihydrofolate synthase | D5071_03900 | Not Available | Positive | 826071 - 827339 | 45891.7 |
| cell division protein dedd | D5071_03905 | Not Available | Positive | 827329 - 828093 | 26798.0 |
| colicin v production protein | D5071_03910 | Not Available | Positive | 828426 - 828926 | 18704.9 |
| amidophosphoribosyltransferase | D5071_03915 | Not Available | Positive | 828948 - 830465 | 56690.5 |
| ubix family flavin prenyltransferase | D5071_03920 | Not Available | Positive | 830681 - 831253 | 20849.6 |
| histidine abc transporter substrate-binding protein hisj | D5071_03925 | Not Available | Positive | 831668 - 832447 | 28047.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
