Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase fadi | D5071_03775 | Not Available | Positive | 798612 - 799925 | 46350.9 |
| fatty acid oxidation complex subunit alpha fadj | D5071_03780 | Not Available | Positive | 799922 - 802138 | 80596.5 |
| scpu domain-containing protein | D5071_03785 | Not Available | Negative | 802131 - 803141 | 36206.8 |
| fimbrial biogenesis outer membrane usher protein | D5071_03790 | Not Available | Negative | 803146 - 805512 | 86348.8 |
| molecular chaperone | D5071_03795 | Not Available | Negative | 805571 - 806344 | 29019.1 |
| scpu domain-containing protein | D5071_03800 | Not Available | Negative | 806380 - 806916 | 18490.0 |
| scpu domain-containing protein | D5071_03805 | Not Available | Negative | 807115 - 807663 | 18548.9 |
| phosphohistidine phosphatase sixa | D5071_03810 | Not Available | Positive | 808797 - 809279 | 17229.6 |
| endonuclease smrb | D5071_03815 | Not Available | Negative | 809365 - 809907 | 20404.5 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | D5071_03820 | Not Available | Positive | 810079 - 811011 | 35194.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
