Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_03520 | Not Available | Negative | 754420 - 754605 | 6849.41 |
| transcriptional regulator | D5071_03525 | Not Available | Negative | 754637 - 755182 | 20448.6 |
| flagellin | D5071_03530 | Not Available | Negative | 755234 - 756688 | 51062.4 |
| inovirus gp2 family protein | D5071_03535 | Not Available | Negative | 757594 - 758220 | 24414.1 |
| alpa family phage regulatory protein | D5071_03540 | Not Available | Negative | 758573 - 758776 | 8188.75 |
| hypothetical protein | D5071_03545 | Not Available | Positive | 759202 - 760236 | 40506.8 |
| hypothetical protein | D5071_03550 | Not Available | Positive | 760884 - 761348 | 17113.1 |
| hypothetical protein | D5071_03555 | Not Available | Positive | 761588 - 762403 | 30238.3 |
| hypothetical protein | D5071_03560 | Not Available | Positive | 762436 - 762930 | 18421.1 |
| dna repair protein radc | D5071_03565 | Not Available | Positive | 763008 - 763481 | 17552.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
