Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_03460 | Not Available | Positive | 735369 - 736499 | 41489.9 |
| hypothetical protein | D5071_03465 | Not Available | Positive | 736496 - 737287 | 29080.9 |
| hypothetical protein | D5071_03475 | Not Available | Negative | 738956 - 741145 | 82912.1 |
| duf4297 domain-containing protein | D5071_03480 | Not Available | Negative | 741142 - 742758 | 62131.0 |
| duf262 domain-containing protein | D5071_03485 | Not Available | Negative | 743059 - 744984 | 74049.2 |
| duf262 domain-containing protein | D5071_03490 | Not Available | Negative | 744971 - 746311 | 52074.6 |
| type i restriction endonuclease subunit r | D5071_03495 | Not Available | Negative | 746884 - 750006 | 120069.0 |
| anticodon nuclease | D5071_03500 | Not Available | Negative | 749999 - 751198 | 46148.3 |
| restriction endonuclease subunit s | D5071_03505 | Not Available | Negative | 751200 - 752381 | 45003.2 |
| type i restriction-modification system subunit m | D5071_03510 | Not Available | Negative | 752378 - 753934 | 57537.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
