Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mosc domain-containing protein | D5071_03410 | Not Available | Positive | 724014 - 725117 | 40463.6 |
| cell division protein zapc | D5071_03415 | Not Available | Negative | 725190 - 725777 | 21998.4 |
| quinone-dependent dihydroorotate dehydrogenase | D5071_03420 | Not Available | Negative | 725979 - 726989 | 36817.8 |
| aminopeptidase n | D5071_03425 | Not Available | Negative | 727195 - 729810 | 98898.2 |
| nicotinate phosphoribosyltransferase | D5071_03430 | Not Available | Positive | 730034 - 731239 | 45992.1 |
| Trna-cys | Not Available | Not Available | Positive | 731370 - 731443 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 731452 - 731538 | Not Available |
| duf4102 domain-containing protein | D5071_03445 | Not Available | Positive | 731741 - 732991 | 47538.2 |
| radical sam protein | D5071_03450 | Not Available | Positive | 733487 - 734515 | 38498.6 |
| histidinol-phosphatase hisj family protein | D5071_03455 | Not Available | Positive | 734512 - 735357 | 31486.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
