Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydiu family protein | D5071_03360 | Not Available | Negative | 709537 - 710988 | 55413.6 |
| hypothetical protein | D5071_03365 | Not Available | Positive | 711432 - 712448 | 38577.6 |
| hypothetical protein | D5071_03370 | Not Available | Positive | 712802 - 713461 | 25120.0 |
| hypothetical protein | D5071_03375 | Not Available | Negative | 713537 - 715096 | 56115.4 |
| ribosome modulation factor | D5071_03380 | Not Available | Negative | 715513 - 715680 | 6483.78 |
| membrane integrity-associated transporter subunit pqic | D5071_03385 | Not Available | Negative | 715983 - 716549 | 20699.7 |
| intermembrane transport protein pqib | D5071_03390 | Not Available | Negative | 716549 - 718189 | 60713.1 |
| membrane integrity-associated transporter subunit pqia | D5071_03395 | Not Available | Negative | 718176 - 719552 | 51346.2 |
| abc transporter atp-binding protein | D5071_03400 | Not Available | Negative | 719854 - 721782 | 71906.6 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | D5071_03405 | Not Available | Negative | 721786 - 723903 | 79289.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
