Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | D5071_03305 | Not Available | Negative | 694641 - 697694 | 112858.0 |
| ai-2e family transporter ydik | D5071_03310 | Not Available | Positive | 697991 - 699100 | 40326.0 |
| fad:protein fmn transferase apbe | D5071_03320 | Not Available | Positive | 699629 - 700675 | 37938.4 |
| phosphoenolpyruvate synthase | D5071_03325 | Not Available | Negative | 700879 - 703257 | 87177.1 |
| kinase/pyrophosphorylase | D5071_03330 | Not Available | Positive | 703559 - 704380 | 30597.8 |
| 3-deoxy-7-phosphoheptulonate synthase | D5071_03335 | Not Available | Positive | 704602 - 705648 | 38426.1 |
| hemin-degrading factor | D5071_03340 | Not Available | Positive | 705862 - 706911 | 39778.7 |
| hemin abc transporter substrate-binding protein | D5071_03345 | Not Available | Positive | 706908 - 707726 | 28739.3 |
| iron abc transporter permease | D5071_03350 | Not Available | Positive | 707723 - 708727 | 35742.5 |
| heme abc transporter atp-binding protein | D5071_03355 | Not Available | Positive | 708720 - 709517 | 29611.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
