Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c nitrite reductase pentaheme subunit | D5071_03205 | Not Available | Negative | 671902 - 672471 | 21265.4 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | D5071_03210 | Not Available | Negative | 672520 - 673953 | 53158.9 |
| nucleoside hydrolase | D5071_03215 | Not Available | Negative | 674395 - 675408 | 37556.1 |
| esterase family protein | D5071_03220 | Not Available | Negative | 675520 - 676704 | 43538.0 |
| carbohydrate porin | D5071_03225 | Not Available | Negative | 676797 - 678437 | 60632.8 |
| 6-phospho-beta-glucosidase | D5071_03230 | Not Available | Negative | 678697 - 680091 | 53255.0 |
| pts beta-glucoside transporter subunit iiabc | D5071_03235 | Not Available | Negative | 680127 - 682028 | 67224.0 |
| transcriptional antiterminator bglg | D5071_03240 | Not Available | Negative | 682466 - 683329 | 33133.2 |
| hypothetical protein | D5071_03245 | Not Available | Positive | 683458 - 683706 | 9480.58 |
| pyruvate kinase pykf | D5071_03250 | Not Available | Positive | 683972 - 685384 | 50460.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
