Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_03000 | Not Available | Negative | 636348 - 636535 | 6568.34 |
| Trna-val | Not Available | Not Available | Positive | 636610 - 636686 | Not Available |
| hypothetical protein | D5071_03010 | Not Available | Positive | 636909 - 638504 | 60561.9 |
| hypothetical protein | D5071_03020 | Not Available | Positive | 638995 - 639306 | 10618.7 |
| marr family transcriptional regulator | D5071_03025 | Not Available | Negative | 639303 - 639716 | 15571.1 |
| duf3861 family protein | D5071_03030 | Not Available | Positive | 639798 - 640061 | 10287.6 |
| catalase/peroxidase hpi | D5071_03035 | Not Available | Negative | 640133 - 642307 | 80478.3 |
| hypothetical protein | D5071_03040 | Not Available | Positive | 642489 - 642791 | 11124.2 |
| metallophosphoesterase | D5071_03045 | Not Available | Negative | 642761 - 644026 | 46215.6 |
| deor/glpr transcriptional regulator | D5071_03050 | Not Available | Positive | 644106 - 644879 | 28189.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
