Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | D5071_02900 | Not Available | Positive | 609231 - 609989 | 28080.0 |
| duf496 family protein | D5071_02905 | Not Available | Positive | 610319 - 610636 | 12565.2 |
| comec family protein | D5071_02910 | Not Available | Positive | 610978 - 613251 | 86059.0 |
| lipid a abc transporter atp-binding protein/permease msba | D5071_02915 | Not Available | Positive | 613289 - 615037 | 64444.9 |
| tetraacyldisaccharide 4'-kinase | D5071_02920 | Not Available | Positive | 615034 - 616035 | 37003.6 |
| hypothetical protein | D5071_02925 | Not Available | Positive | 616147 - 616329 | 6784.34 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | D5071_02930 | Not Available | Positive | 616326 - 617078 | 27546.9 |
| duf1565 domain-containing protein | D5071_02935 | Not Available | Positive | 617385 - 618698 | 47045.9 |
| hypothetical protein | D5071_02940 | Not Available | Positive | 619023 - 619916 | 34618.5 |
| envelope biogenesis factor elyc | D5071_02945 | Not Available | Negative | 619868 - 620716 | 30739.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
