Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| triphosphoribosyl-dephospho-coa synthase citg | D5071_02850 | Not Available | Positive | 598289 - 599194 | 32315.7 |
| lysr family transcriptional regulator | D5071_02855 | Not Available | Negative | 599293 - 600186 | 33184.0 |
| nadph-dependent oxidoreductase | D5071_02860 | Not Available | Positive | 600314 - 601165 | 31412.7 |
| flagellar brake protein | D5071_02865 | Not Available | Positive | 601767 - 602522 | 28518.4 |
| hypothetical protein | D5071_02870 | Not Available | Positive | 602935 - 603141 | 6870.16 |
| apc family permease | D5071_02875 | Not Available | Positive | 603131 - 604501 | 49636.7 |
| exodeoxyribonuclease i | D5071_02880 | Not Available | Negative | 604581 - 606008 | 54174.4 |
| siderophore abc transporter substrate-binding protein | D5071_02885 | Not Available | Positive | 606291 - 607256 | 34684.1 |
| abc transporter permease | D5071_02890 | Not Available | Positive | 607278 - 608240 | 34459.0 |
| enterobactin abc transporter permease | D5071_02895 | Not Available | Positive | 608227 - 609234 | 36222.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
