Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine-responsive transcriptional regulator lrp | D5071_02650 | Not Available | Positive | 548512 - 549006 | 18857.9 |
| cell division protein ftsk | D5071_02655 | Not Available | Positive | 549121 - 552609 | 126356.0 |
| outer membrane lipoprotein chaperone lola | D5071_02660 | Not Available | Positive | 552858 - 553469 | 22483.1 |
| replication-associated recombination protein a | D5071_02665 | Not Available | Positive | 553477 - 554820 | 49333.6 |
| serine--trna ligase | D5071_02670 | Not Available | Positive | 554924 - 556219 | 48742.2 |
| mfs transporter | D5071_02675 | Not Available | Positive | 556541 - 557695 | 41728.1 |
| lysr family transcriptional regulator | D5071_02680 | Not Available | Negative | 557681 - 558622 | 34477.6 |
| cytosine permease | D5071_02685 | Not Available | Positive | 558898 - 560202 | 46446.9 |
| duf917 domain-containing protein | D5071_02690 | Not Available | Positive | 560240 - 561349 | 39619.9 |
| hydantoinase/oxoprolinase family protein | D5071_02695 | Not Available | Positive | 561360 - 562928 | 56119.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
