Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine abc transporter permease artq | D5071_02545 | Not Available | Negative | 525282 - 525998 | 26353.2 |
| arginine abc transporter substrate-binding protein | D5071_02550 | Not Available | Negative | 526010 - 526741 | 26961.0 |
| arginine abc transporter atp-binding protein artp | D5071_02555 | Not Available | Negative | 526762 - 527511 | 27814.7 |
| hypothetical protein | D5071_02560 | Not Available | Positive | 527697 - 528020 | 11605.9 |
| n-acetylmuramoyl-l-alanine amidase | D5071_02565 | Not Available | Positive | 528082 - 528909 | 30617.3 |
| duf2867 domain-containing protein | D5071_02570 | Not Available | Negative | 528906 - 530342 | 53212.6 |
| nadh oxidoreductase | D5071_02575 | Not Available | Negative | 530573 - 531598 | 37319.0 |
| hydroxylamine reductase | D5071_02580 | Not Available | Negative | 531738 - 533390 | 60009.1 |
| lysine exporter lyso family protein | D5071_02585 | Not Available | Negative | 533580 - 534479 | 32455.1 |
| duf2813 domain-containing protein | D5071_02590 | Not Available | Positive | 534793 - 536457 | 63471.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
