Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6--l-glutamate ligase | D5071_02490 | Not Available | Positive | 514950 - 515861 | 32901.9 |
| ybjn domain-containing protein | D5071_02495 | Not Available | Positive | 516128 - 516607 | 17634.2 |
| spermidine/putrescine abc transporter substrate-binding protein potf | D5071_02500 | Not Available | Positive | 516979 - 518088 | 40613.5 |
| putrescine abc transporter atp-binding subunit potg | D5071_02505 | Not Available | Positive | 518291 - 519424 | 42062.2 |
| putrescine abc transporter permease poth | D5071_02510 | Not Available | Positive | 519439 - 520404 | 36260.6 |
| putrescine abc transporter permease poti | D5071_02515 | Not Available | Positive | 520401 - 521246 | 30861.9 |
| duf2593 family protein | D5071_02520 | Not Available | Positive | 521454 - 521906 | 16624.0 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | D5071_02525 | Not Available | Positive | 522032 - 523165 | 42179.1 |
| arginine abc transporter substrate-binding protein | D5071_02535 | Not Available | Negative | 523522 - 524253 | 26656.7 |
| arginine abc transporter permease artm | D5071_02540 | Not Available | Negative | 524614 - 525282 | 24693.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
