Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein | D5071_02440 | Not Available | Positive | 505981 - 506997 | 36187.1 |
| abc transporter permease | D5071_02445 | Not Available | Positive | 506990 - 507649 | 23456.5 |
| serine-type d-ala-d-ala carboxypeptidase | D5071_02450 | Not Available | Positive | 507935 - 509140 | 43925.7 |
| dna-binding transcriptional repressor deor | D5071_02455 | Not Available | Negative | 509137 - 509910 | 28169.8 |
| deoxyribose-phosphate aldolase | D5071_02460 | Not Available | Negative | 509942 - 510610 | 23347.1 |
| hypothetical protein | D5071_02465 | Not Available | Negative | 510697 - 510876 | 7068.84 |
| transporter | D5071_02470 | Not Available | Negative | 511135 - 512823 | 60535.9 |
| hypothetical protein | D5071_02475 | Not Available | Positive | 513200 - 513571 | 13731.5 |
| grxa family glutaredoxin | D5071_02480 | Not Available | Negative | 513639 - 513905 | 9953.85 |
| oxygen-insensitive nadph nitroreductase | D5071_02485 | Not Available | Positive | 514214 - 514933 | 26950.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
