Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | D5071_02390 | Not Available | Positive | 495334 - 497013 | 60023.4 |
| gtp cyclohydrolase i fole | D5071_02395 | Not Available | Positive | 497334 - 497996 | 24585.8 |
| duf418 family protein | D5071_02400 | Not Available | Positive | 498119 - 499306 | 44313.2 |
| outer membrane permeability protein sana | D5071_02405 | Not Available | Negative | 499316 - 500095 | 29214.4 |
| 30s ribosomal protein s12 methylthiotransferase rimo | D5071_02410 | Not Available | Negative | 500277 - 501590 | 48985.9 |
| hypothetical protein | D5071_02415 | Not Available | Positive | 501803 - 502054 | 9266.41 |
| hypothetical protein | D5071_02420 | Not Available | Positive | 502042 - 502704 | 25310.3 |
| pqq-dependent sugar dehydrogenase | D5071_02425 | Not Available | Positive | 502844 - 504010 | 42920.1 |
| glutathione s-transferase | D5071_02430 | Not Available | Negative | 504293 - 504910 | 23261.8 |
| metal abc transporter substrate-binding protein | D5071_02435 | Not Available | Positive | 505054 - 505899 | 30323.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
