Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | D5071_02340 | Not Available | Positive | 482432 - 484549 | 76334.8 |
| 2-hydroxyacid dehydrogenase | D5071_02345 | Not Available | Positive | 485049 - 486038 | 36092.7 |
| abc transporter permease | D5071_02350 | Not Available | Negative | 486459 - 487454 | 34819.8 |
| sugar abc transporter atp-binding protein | D5071_02355 | Not Available | Negative | 487451 - 488962 | 55197.4 |
| oxidoreductase | D5071_02360 | Not Available | Positive | 489229 - 490317 | 38547.5 |
| ktsc domain-containing protein | D5071_02365 | Not Available | Negative | 490382 - 490594 | 8238.83 |
| glutathione s-transferase | D5071_02370 | Not Available | Negative | 490808 - 491452 | 24481.8 |
| s-formylglutathione hydrolase | D5071_02375 | Not Available | Negative | 491619 - 492464 | 31623.0 |
| s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenase | D5071_02380 | Not Available | Negative | 492507 - 493622 | 39203.4 |
| lysr family transcriptional regulator | D5071_02385 | Not Available | Negative | 493742 - 494632 | 32501.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
