Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p-like protein yeip | D5071_02290 | Not Available | Negative | 471103 - 471675 | 21397.7 |
| ykgj family cysteine cluster protein | D5071_02295 | Not Available | Positive | 471836 - 472090 | 9104.16 |
| sugar efflux transporter setb | D5071_02300 | Not Available | Negative | 472101 - 473279 | 42620.6 |
| bifunctional pts fructose transporter subunit iia/hpr protein | D5071_02305 | Not Available | Positive | 473614 - 474747 | 39523.9 |
| 1-phosphofructokinase | D5071_02310 | Not Available | Positive | 474744 - 475682 | 33581.3 |
| pts fructose transporter subunit iibc | D5071_02315 | Not Available | Positive | 475701 - 477392 | 57425.4 |
| deoxyribonuclease iv | D5071_02320 | Not Available | Negative | 477502 - 478347 | 30979.6 |
| yeih family putative sulfate export transporter | D5071_02325 | Not Available | Negative | 478438 - 479511 | 38552.4 |
| lysr family transcriptional regulator | D5071_02330 | Not Available | Positive | 479632 - 480504 | 32335.3 |
| amino acid permease | D5071_02335 | Not Available | Positive | 480640 - 482115 | 53945.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
