Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bcr/cfla family drug resistance efflux transporter | D5071_02240 | Not Available | Positive | 460393 - 461583 | 43194.3 |
| hypothetical protein | D5071_02245 | Not Available | Positive | 461967 - 462311 | 12877.4 |
| microcin c abc transporter atp-binding protein yejf | D5071_02250 | Not Available | Negative | 462352 - 463968 | 60047.9 |
| abc transporter permease subunit | D5071_02255 | Not Available | Negative | 463970 - 464995 | 38231.7 |
| microcin c abc transporter permease yejb | D5071_02260 | Not Available | Negative | 464992 - 466089 | 40665.1 |
| abc transporter substrate-binding protein | D5071_02265 | Not Available | Negative | 466099 - 467907 | 69159.7 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | D5071_02270 | Not Available | Negative | 468372 - 468953 | 21781.0 |
| hypothetical protein | D5071_02275 | Not Available | Positive | 469026 - 469223 | 7651.15 |
| phosphatase pap2 family protein | D5071_02280 | Not Available | Negative | 469266 - 469976 | 26443.8 |
| gtp-binding protein | D5071_02285 | Not Available | Negative | 470015 - 471016 | 36787.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
