Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4102 domain-containing protein | D5071_02190 | Not Available | Negative | 450745 - 451995 | 46760.6 |
| Trna-pro | Not Available | Not Available | Positive | 452183 - 452259 | Not Available |
| duf3413 domain-containing protein | D5071_02200 | Not Available | Negative | 452338 - 454086 | 66373.6 |
| duf1414 domain-containing protein | D5071_02205 | Not Available | Negative | 454101 - 454331 | 8396.13 |
| nucleoid-associated protein yejk | D5071_02210 | Not Available | Positive | 454550 - 455560 | 38086.9 |
| duf1624 domain-containing protein | D5071_02215 | Not Available | Negative | 455640 - 456788 | 43703.9 |
| 50s ribosomal protein l25 | D5071_02220 | Not Available | Negative | 456887 - 457171 | 10392.6 |
| dead/deah box helicase | D5071_02225 | Not Available | Negative | 457431 - 459191 | 66518.8 |
| duf2492 family protein | D5071_02230 | Not Available | Negative | 459194 - 459433 | 8780.46 |
| 16s rrna pseudouridine(516) synthase rsua | D5071_02235 | Not Available | Positive | 459657 - 460352 | 26149.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
