Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_02135 | Not Available | Negative | 440910 - 441656 | 28486.9 |
| type ii toxin-antitoxin system rele/pare family toxin | D5071_02145 | Not Available | Negative | 443001 - 443285 | 11113.6 |
| ribbon-helix-helix protein, copg family | D5071_02150 | Not Available | Negative | 443275 - 443520 | 8859.38 |
| tetr family transcriptional regulator | D5071_02155 | Not Available | Negative | 443673 - 444263 | 22176.7 |
| nad-dependent epimerase/dehydratase family protein | D5071_02160 | Not Available | Negative | 444388 - 445263 | 31851.9 |
| duf927 domain-containing protein | D5071_02165 | Not Available | Negative | 446072 - 448678 | 93097.1 |
| host cell division inhibitor icd-like protein | D5071_02170 | Not Available | Negative | 448835 - 449035 | 7758.26 |
| duf3950 domain-containing protein | D5071_02175 | Not Available | Positive | 449202 - 449393 | 6989.16 |
| alpa family phage regulatory protein | D5071_02180 | Not Available | Negative | 449533 - 449748 | 8353.01 |
| hypothetical protein | D5071_02185 | Not Available | Negative | 449942 - 450568 | 22904.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
