Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| degt/dnrj/eryc1/strs family aminotransferase | D5071_02085 | Not Available | Positive | 430480 - 431592 | 41490.8 |
| hypothetical protein | D5071_02090 | Not Available | Positive | 431712 - 432413 | 27024.5 |
| glycosylase | D5071_02095 | Not Available | Positive | 432416 - 433375 | 36910.5 |
| hypothetical protein | D5071_02100 | Not Available | Positive | 433375 - 434343 | 36623.2 |
| gnat family n-acetyltransferase | D5071_02105 | Not Available | Positive | 434331 - 434783 | 16830.4 |
| class i sam-dependent methyltransferase | D5071_02110 | Not Available | Positive | 434780 - 435520 | 28099.3 |
| hypothetical protein | D5071_02115 | Not Available | Positive | 435590 - 437008 | 53890.3 |
| rna polymerase sigma factor flia | D5071_02120 | Not Available | Positive | 437602 - 438324 | 27520.6 |
| flagellar regulatory protein fliz | D5071_02125 | Not Available | Positive | 438529 - 439044 | 20616.6 |
| phosphate starvation-inducible protein phoh | D5071_02130 | Not Available | Positive | 439576 - 440364 | 29335.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
