Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellum-specific atp synthase flil | D5071_02035 | Not Available | Negative | 417480 - 418850 | 49378.3 |
| flagellar assembly protein flih | D5071_02040 | Not Available | Negative | 418850 - 419572 | 26519.2 |
| flagellar motor switch protein flig | D5071_02045 | Not Available | Negative | 419565 - 420557 | 36760.2 |
| flagellar basal body m-ring protein flif | D5071_02050 | Not Available | Negative | 420554 - 422278 | 62067.5 |
| flagellar hook-basal body complex protein flie | D5071_02055 | Not Available | Positive | 422539 - 422853 | 11181.6 |
| flagella biosynthesis regulatory protein flit | D5071_02060 | Not Available | Negative | 423132 - 423512 | 14182.2 |
| flagella export chaperone flis | D5071_02065 | Not Available | Negative | 423512 - 423922 | 14996.2 |
| flagellar filament capping protein flid | D5071_02070 | Not Available | Negative | 423953 - 425377 | 50765.9 |
| flagellin flic | D5071_02075 | Not Available | Positive | 425647 - 426519 | 30071.1 |
| methyltransferase domain-containing protein | D5071_02080 | Not Available | Positive | 426745 - 430164 | 127654.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
