Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-filament junction protein flgl | D5071_01985 | Not Available | Positive | 410064 - 411017 | 34025.8 |
| flagellar type iii secretion system protein flir | D5071_01990 | Not Available | Negative | 411400 - 412185 | 28343.8 |
| flagellar biosynthetic protein fliq | D5071_01995 | Not Available | Negative | 412188 - 412457 | 9641.43 |
| flagellar biosynthetic protein flip | D5071_02000 | Not Available | Negative | 412478 - 413254 | 28484.9 |
| flagellar biosynthetic protein flio | D5071_02005 | Not Available | Negative | 413251 - 413673 | 15005.5 |
| flagellar motor switch protein flin | D5071_02010 | Not Available | Negative | 413673 - 414086 | 14991.0 |
| flagellar motor switch protein flim | D5071_02015 | Not Available | Negative | 414079 - 415092 | 37915.4 |
| flagellar basal body-associated protein flil | D5071_02020 | Not Available | Negative | 415098 - 415577 | 17711.6 |
| flagellar hook-length control protein flik | D5071_02025 | Not Available | Negative | 415733 - 417028 | 44773.8 |
| flagella biosynthesis chaperone flij | D5071_02030 | Not Available | Negative | 417025 - 417471 | 17544.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
