Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body rod protein flgb | D5071_01935 | Not Available | Positive | 400771 - 401187 | 15211.0 |
| flagellar basal body rod protein flgc | D5071_01940 | Not Available | Positive | 401216 - 401620 | 14125.7 |
| flagellar hook assembly protein flgd | D5071_01945 | Not Available | Positive | 401636 - 402319 | 23773.9 |
| flagellar hook protein flge | D5071_01950 | Not Available | Positive | 402394 - 403650 | 43158.9 |
| flagellar basal body rod protein flgf | D5071_01955 | Not Available | Positive | 403672 - 404427 | 26548.7 |
| flagellar basal-body rod protein flgg | D5071_01960 | Not Available | Positive | 404455 - 405237 | 27929.8 |
| flagellar basal body l-ring protein flgh | D5071_01965 | Not Available | Positive | 405411 - 406124 | 25187.8 |
| flagellar p-ring protein | D5071_01970 | Not Available | Positive | 406141 - 407250 | 38335.2 |
| flagellar assembly peptidoglycan hydrolase flgj | D5071_01975 | Not Available | Positive | 407250 - 408212 | 34660.3 |
| flagellar hook-associated protein flgk | D5071_01980 | Not Available | Positive | 408338 - 410032 | 59711.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
