Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-glutamate o-methyltransferase cher | D5071_01885 | Not Available | Positive | 392105 - 392977 | 33101.8 |
| chemotaxis response regulator protein-glutamate methylesterase | D5071_01890 | Not Available | Positive | 392977 - 394029 | 37916.6 |
| chemotaxis protein chey | D5071_01895 | Not Available | Positive | 394068 - 394457 | 14153.2 |
| protein phosphatase chez | D5071_01900 | Not Available | Positive | 394467 - 395111 | 23817.2 |
| flagellar type iii secretion system protein flhb | D5071_01905 | Not Available | Positive | 395356 - 396507 | 42428.5 |
| flagellar biosynthesis protein flha | D5071_01910 | Not Available | Positive | 396500 - 398584 | 75160.9 |
| flagellar protein flhe | D5071_01915 | Not Available | Positive | 398581 - 399000 | 15130.1 |
| flagellar biosynthesis protein flgn | D5071_01920 | Not Available | Negative | 399056 - 399493 | 16346.6 |
| anti-sigma-28 factor flgm | D5071_01925 | Not Available | Negative | 399499 - 399795 | 10669.7 |
| flagellar basal body p-ring formation protein flga | D5071_01930 | Not Available | Negative | 399937 - 400605 | 24088.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
