Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_01835 | Not Available | Positive | 380270 - 380449 | 6974.58 |
| hamp domain-containing protein | D5071_01840 | Not Available | Negative | 380415 - 382136 | 61613.0 |
| dmt family transporter | D5071_01845 | Not Available | Positive | 382446 - 383378 | 34153.5 |
| flagellar transcriptional regulator flhd | D5071_01850 | Not Available | Positive | 384196 - 384546 | 13349.3 |
| flagellar transcriptional regulator flhc | D5071_01855 | Not Available | Positive | 384550 - 385128 | 21770.6 |
| flagellar motor stator protein mota | D5071_01860 | Not Available | Positive | 385263 - 386150 | 31990.4 |
| motility protein motb | D5071_01865 | Not Available | Positive | 386147 - 387202 | 38488.9 |
| chemotaxis protein chea | D5071_01870 | Not Available | Positive | 387236 - 389245 | 72041.2 |
| chemotaxis protein chew | D5071_01875 | Not Available | Positive | 389277 - 389774 | 17956.9 |
| hamp domain-containing protein | D5071_01880 | Not Available | Positive | 389910 - 391595 | 60153.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
