Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_01735 | Not Available | Negative | 356868 - 357185 | 11931.8 |
| universal stress protein uspb | D5071_01740 | Not Available | Positive | 357520 - 357855 | 13064.2 |
| anion permease | D5071_01745 | Not Available | Negative | 357988 - 359493 | 54265.4 |
| nad(p)/fad-dependent oxidoreductase | D5071_01750 | Not Available | Positive | 359770 - 360969 | 43681.2 |
| eal domain-containing protein | D5071_01755 | Not Available | Positive | 361062 - 362666 | 60417.0 |
| virulence protein | D5071_01760 | Not Available | Negative | 362710 - 363240 | 19379.7 |
| Trna-pro | Not Available | Not Available | Positive | 363676 - 363752 | Not Available |
| kdo(2)-lipid a phosphoethanolamine 7''-transferase | D5071_01770 | Not Available | Negative | 363884 - 365563 | 63788.8 |
| nad-dependent dna ligase ligb | D5071_01775 | Not Available | Negative | 365819 - 367510 | 63828.8 |
| guanylate kinase | D5071_01780 | Not Available | Positive | 367832 - 368455 | 23562.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
