Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| siderophore-interacting protein | D5071_01630 | Not Available | Negative | 331429 - 332334 | 33627.6 |
| rhia | D5071_01635 | Not Available | Positive | 332800 - 333402 | 22112.6 |
| hypothetical protein | D5071_01640 | Not Available | Positive | 333469 - 333828 | 13297.5 |
| hypothetical protein | D5071_01645 | Not Available | Negative | 333897 - 334286 | 14715.7 |
| glutathione-disulfide reductase | D5071_01650 | Not Available | Negative | 334717 - 336069 | 48775.1 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | D5071_01655 | Not Available | Negative | 336198 - 337040 | 32119.8 |
| duf1266 domain-containing protein | D5071_01660 | Not Available | Positive | 337259 - 337987 | 28077.9 |
| j domain-containing protein | D5071_01665 | Not Available | Positive | 337987 - 340716 | 104610.0 |
| molecular chaperone hscc | D5071_01670 | Not Available | Negative | 340761 - 342452 | 62735.5 |
| duf2623 domain-containing protein | D5071_01675 | Not Available | Positive | 342673 - 342966 | 11149.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
