Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_21810 | Not Available | Negative | 4795415 - 4795642 | 8168.83 |
| hypothetical protein | D5071_21815 | Not Available | Negative | 4795741 - 4796514 | 28170.3 |
| duf1738 domain-containing protein | D5071_21820 | Not Available | Negative | 4797088 - 4798032 | 34547.8 |
| atpase | D5071_21825 | Not Available | Positive | 4798658 - 4800967 | 84546.4 |
| atp-binding protein | D5071_21830 | Not Available | Positive | 4800971 - 4802287 | 48861.0 |
| dead/deah box helicase | D5071_21835 | Not Available | Positive | 4802284 - 4804482 | 81428.0 |
| hypothetical protein | D5071_21840 | Not Available | Negative | 4805128 - 4807254 | 81025.3 |
| hypothetical protein | D5071_21845 | Not Available | Negative | 4807247 - 4811230 | 153149.0 |
| duf4102 domain-containing protein | D5071_21850 | Not Available | Positive | 4812058 - 4812499 | 17034.3 |
| phosphoribosylamine--glycine ligase | D5071_21855 | Not Available | Negative | 4812689 - 4813975 | 45294.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
