Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | D5071_21655 | Not Available | Positive | 4756226 - 4757488 | 47204.7 |
| hypothetical protein | D5071_21660 | Not Available | Negative | 4757629 - 4758787 | 44040.6 |
| duf333 domain-containing protein | D5071_21670 | Not Available | Positive | 4759287 - 4759577 | 9944.92 |
| 2-hydroxyacid dehydrogenase | D5071_21675 | Not Available | Negative | 4759611 - 4760603 | 36419.8 |
| pas domain-containing protein | D5071_21680 | Not Available | Negative | 4760723 - 4762276 | 56992.2 |
| pas domain s-box protein | D5071_21685 | Not Available | Negative | 4762642 - 4764195 | 56817.3 |
| ydbh family protein | D5071_21690 | Not Available | Positive | 4764568 - 4767159 | 96338.4 |
| ynbe family lipoprotein | D5071_21695 | Not Available | Positive | 4767175 - 4767408 | 8378.21 |
| fmn-dependent nadh-azoreductase | D5071_21700 | Not Available | Negative | 4767452 - 4768057 | 21826.2 |
| atp-dependent rna helicase hrpa | D5071_21705 | Not Available | Positive | 4768364 - 4772251 | 148000.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
