Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase | D5071_21605 | Not Available | Negative | 4740681 - 4741625 | 33676.5 |
| metq/nlpa family lipoprotein | D5071_21610 | Not Available | Negative | 4741850 - 4742662 | 29484.3 |
| dna-binding response regulator | D5071_21615 | Not Available | Positive | 4742926 - 4743555 | 22965.0 |
| mase1 sensor histidine kinase | D5071_21620 | Not Available | Positive | 4743559 - 4745133 | 59456.3 |
| mfs transporter | D5071_21625 | Not Available | Positive | 4745223 - 4746548 | 49204.1 |
| abc transporter substrate-binding protein | D5071_21630 | Not Available | Positive | 4746780 - 4747814 | 37619.7 |
| iron abc transporter permease | D5071_21635 | Not Available | Positive | 4748012 - 4750090 | 75902.5 |
| ferric abc transporter atp-binding protein | D5071_21640 | Not Available | Positive | 4750105 - 4751154 | 38931.9 |
| laci family dna-binding transcriptional regulator | D5071_21645 | Not Available | Positive | 4751355 - 4752431 | 38881.7 |
| beta-galactosidase | D5071_21650 | Not Available | Positive | 4752761 - 4755892 | 119914.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
