Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replicative dna helicase | D5071_21555 | Not Available | Negative | 4732383 - 4733750 | 50690.3 |
| hypothetical protein | D5071_21560 | Not Available | Negative | 4733743 - 4734141 | 15127.0 |
| hypothetical protein | D5071_21565 | Not Available | Positive | 4734372 - 4734779 | 16007.7 |
| para family protein | D5071_21570 | Not Available | Negative | 4734793 - 4735680 | 32470.3 |
| duf4102 domain-containing protein | D5071_21575 | Not Available | Positive | 4735940 - 4737202 | 47953.7 |
| hypothetical protein | D5071_21580 | Not Available | Positive | 4737665 - 4738006 | 12237.2 |
| hypothetical protein | D5071_21585 | Not Available | Positive | 4738176 - 4738928 | 27995.8 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobc | D5071_21590 | Not Available | Positive | 4738906 - 4739649 | 28927.4 |
| type ii toxin-antitoxin system antitoxin ccda | D5071_21595 | Not Available | Positive | 4739707 - 4739925 | 8178.56 |
| type ii toxin-antitoxin system toxin ccdb | D5071_21600 | Not Available | Positive | 4739928 - 4740239 | 12125.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
