Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_21505 | Not Available | Negative | 4722545 - 4723129 | 22223.8 |
| single-stranded dna-binding protein | D5071_21510 | Not Available | Negative | 4723281 - 4723781 | 18026.1 |
| duf3577 domain-containing protein | D5071_21515 | Not Available | Negative | 4723846 - 4724343 | 17889.9 |
| dna topoisomerase iii | D5071_21520 | Not Available | Negative | 4725190 - 4727208 | 75146.4 |
| tigr03761 family integrating conjugative element protein | D5071_21525 | Not Available | Negative | 4727205 - 4728002 | 29590.9 |
| helix-turn-helix domain-containing protein | D5071_21530 | Not Available | Negative | 4728389 - 4729582 | 44580.5 |
| hypothetical protein | D5071_21535 | Not Available | Negative | 4729754 - 4730008 | 10111.2 |
| duf2857 domain-containing protein | D5071_21540 | Not Available | Negative | 4730017 - 4730631 | 23093.7 |
| hypothetical protein | D5071_21545 | Not Available | Negative | 4730659 - 4730928 | 10156.1 |
| hypothetical protein | D5071_21550 | Not Available | Negative | 4730932 - 4732383 | 53626.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
