Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D5071_01575 | Not Available | Positive | 321886 - 323571 | 61657.9 |
| alkylhydroperoxidase domain protein | D5071_01585 | Not Available | Positive | 324500 - 325633 | 41571.9 |
| phenolic acid decarboxylase | D5071_01590 | Not Available | Negative | 325692 - 326201 | 19538.9 |
| lysr family transcriptional regulator | D5071_01595 | Not Available | Positive | 326304 - 327176 | 32720.4 |
| helix-turn-helix domain-containing protein | D5071_01600 | Not Available | Positive | 327339 - 327665 | 11752.2 |
| type ii toxin-antitoxin system hipa family toxin | D5071_01605 | Not Available | Positive | 327650 - 327964 | 11930.4 |
| type ii toxin-antitoxin system hipa family toxin | D5071_01610 | Not Available | Positive | 327961 - 329001 | 39626.0 |
| lyse family translocator | D5071_01615 | Not Available | Negative | 329061 - 329684 | 22816.6 |
| beta-1 3-glucan biosynthesis protein | D5071_01620 | Not Available | Positive | 329866 - 330570 | 26627.1 |
| thiol:disulfide interchange protein dsbg | D5071_01625 | Not Available | Positive | 330640 - 331395 | 27758.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
