Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dicarboxylate/amino acid:cation symporter | D5071_21455 | Not Available | Positive | 4712174 - 4713484 | 47130.5 |
| hth-type transcriptional regulator | D5071_21460 | Not Available | Negative | 4713572 - 4714471 | 34299.0 |
| aspartate racemase | D5071_21465 | Not Available | Positive | 4714711 - 4714938 | 8234.2 |
| pilus assembly protein | D5071_21470 | Not Available | Negative | 4715026 - 4716585 | 57806.6 |
| type iv pilus biogenesis protein pilp | D5071_21475 | Not Available | Negative | 4716585 - 4717103 | 18556.4 |
| hypothetical protein | D5071_21480 | Not Available | Negative | 4717103 - 4718410 | 47485.5 |
| piln family type ivb pilus formation outer membrane protein | D5071_21485 | Not Available | Negative | 4718421 - 4720085 | 59386.0 |
| pilus assembly protein | D5071_21490 | Not Available | Negative | 4720095 - 4720541 | 16097.6 |
| pilus assembly protein | D5071_21495 | Not Available | Negative | 4720541 - 4721884 | 47409.9 |
| duf29 domain-containing protein | D5071_21500 | Not Available | Negative | 4722035 - 4722472 | 16759.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
