Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_21305 | Not Available | Positive | 4679931 - 4680731 | 31534.6 |
| duf4756 family protein | D5071_21310 | Not Available | Positive | 4680829 - 4681308 | 18388.8 |
| hypothetical protein | D5071_21315 | Not Available | Positive | 4681579 - 4682535 | 36005.3 |
| dna-binding protein | D5071_21320 | Not Available | Negative | 4682806 - 4683078 | 10864.1 |
| hypothetical protein | D5071_21325 | Not Available | Negative | 4683117 - 4683467 | 13886.8 |
| hypothetical protein | D5071_21330 | Not Available | Negative | 4683507 - 4683743 | 8648.38 |
| hypothetical protein | D5071_21335 | Not Available | Negative | 4683793 - 4684089 | 11307.2 |
| hypothetical protein | D5071_21340 | Not Available | Negative | 4684167 - 4684481 | 12301.9 |
| alpa family transcriptional regulator | D5071_21345 | Not Available | Negative | 4684512 - 4684730 | 8344.29 |
| hypothetical protein | D5071_21350 | Not Available | Negative | 4684880 - 4685755 | 34223.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
