Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_21245 | Not Available | Positive | 4667423 - 4668145 | 27952.7 |
| conjugal transfer protein | D5071_21255 | Not Available | Positive | 4669988 - 4671385 | 53083.8 |
| hypothetical protein | D5071_21260 | Not Available | Negative | 4671436 - 4672380 | 37109.0 |
| dna-directed rna polymerase subunit beta | D5071_21265 | Not Available | Negative | 4672798 - 4673352 | 19898.6 |
| hypothetical protein | D5071_21275 | Not Available | Positive | 4673990 - 4674367 | 13867.6 |
| hypothetical protein | D5071_21280 | Not Available | Positive | 4674554 - 4674883 | 12299.1 |
| hypothetical protein | D5071_21285 | Not Available | Negative | 4674966 - 4675955 | 37614.6 |
| hypothetical protein | D5071_21290 | Not Available | Negative | 4676022 - 4676708 | 26055.0 |
| hypothetical protein | D5071_21295 | Not Available | Negative | 4676812 - 4677570 | 29220.0 |
| dna-binding protein | D5071_21300 | Not Available | Positive | 4679174 - 4679908 | 28084.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
