Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase subunit frdc | D5071_21190 | Not Available | Positive | 4658702 - 4659097 | 14670.6 |
| fumarate reductase subunit d | D5071_21195 | Not Available | Positive | 4659112 - 4659468 | 13025.5 |
| hypothetical protein | D5071_21200 | Not Available | Positive | 4659592 - 4660176 | 22260.7 |
| hypothetical protein | D5071_21210 | Not Available | Negative | 4660765 - 4661394 | 22777.8 |
| mfs transporter | D5071_21215 | Not Available | Negative | 4662050 - 4663282 | 42254.7 |
| hypothetical protein | D5071_21220 | Not Available | Positive | 4663416 - 4663940 | 19777.4 |
| transcriptional regulator | D5071_21225 | Not Available | Negative | 4664067 - 4664390 | 12138.6 |
| alpha/beta hydrolase | D5071_21230 | Not Available | Positive | 4664438 - 4665277 | 31173.4 |
| cupin domain-containing protein | D5071_21235 | Not Available | Positive | 4665288 - 4665923 | 23726.3 |
| hypothetical protein | D5071_21240 | Not Available | Negative | 4665975 - 4666520 | 19817.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
