Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D5071_21030 | Not Available | Negative | 4623863 - 4624744 | 33030.5 |
| atp-dependent chaperone clpb | D5071_21035 | Not Available | Negative | 4625182 - 4627758 | 95609.9 |
| peptidoglycan editing factor pgef | D5071_21040 | Not Available | Negative | 4627892 - 4628617 | 25962.1 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | D5071_21045 | Not Available | Negative | 4628661 - 4629638 | 36768.3 |
| outer membrane protein assembly factor bamd | D5071_21055 | Not Available | Positive | 4629773 - 4630507 | 27441.6 |
| ribosome-associated translation inhibitor raia | D5071_21060 | Not Available | Positive | 4630830 - 4631168 | 12550.0 |
| bifunctional chorismate mutase/prephenate dehydratase | D5071_21065 | Not Available | Positive | 4631517 - 4632677 | 43205.8 |
| bifunctional chorismate mutase/prephenate dehydrogenase | D5071_21070 | Not Available | Negative | 4632759 - 4633880 | 42252.3 |
| 3-deoxy-7-phosphoheptulonate synthase | D5071_21075 | Not Available | Negative | 4633887 - 4634960 | 39120.5 |
| two-component system response regulator yeht | D5071_21080 | Not Available | Positive | 4635209 - 4635925 | 27118.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
