Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class iv | D5071_20930 | Not Available | Positive | 4597173 - 4598090 | 33715.0 |
| hypothetical protein | D5071_20935 | Not Available | Positive | 4598194 - 4600248 | 76218.8 |
| dgsa anti-repressor mtfa | D5071_20940 | Not Available | Positive | 4600954 - 4601751 | 30400.3 |
| Trna-asn | Not Available | Not Available | Positive | 4601862 - 4601937 | Not Available |
| duf4102 domain-containing protein | D5071_20950 | Not Available | Positive | 4602117 - 4603341 | 46649.5 |
| dihydrolipoyllysine-residue acetyltransferase | D5071_20955 | Not Available | Positive | 4603342 - 4604525 | 42135.2 |
| dihydrolipoyl dehydrogenase | D5071_20960 | Not Available | Positive | 4604858 - 4606282 | 50492.1 |
| lysr family transcriptional regulator | D5071_20965 | Not Available | Negative | 4606346 - 4607242 | 32895.0 |
| class a beta-lactamase-related serine hydrolase | D5071_20970 | Not Available | Positive | 4607359 - 4608552 | 42650.6 |
| mfs transporter | D5071_20975 | Not Available | Positive | 4608561 - 4609733 | 40381.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
