Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | strain S1.15.11.2D |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Not Available |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Solanum tuberosum, Daucus carota |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1180518 bp
Thymine Count
1171732 bp
Guanine Count
1226236 bp
Cytosine Count
1240350 bp
Genome Length
4818836 bp
Protein-coding Genes
4141 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bcr/cfla family efflux mfs transporter | D5071_20830 | Not Available | Negative | 4572175 - 4573392 | 41593.1 |
| efflux rnd transporter permease subunit | D5071_20835 | Not Available | Negative | 4573509 - 4576598 | 112535.0 |
| efflux rnd transporter periplasmic adaptor subunit | D5071_20840 | Not Available | Negative | 4576595 - 4577704 | 38830.4 |
| tetr/acrr family transcriptional regulator | D5071_20845 | Not Available | Negative | 4577781 - 4578395 | 22893.5 |
| efflux transporter outer membrane subunit | D5071_20850 | Not Available | Positive | 4578483 - 4580000 | 53154.7 |
| lytic murein transglycosylase | D5071_20855 | Not Available | Positive | 4580331 - 4581635 | 48323.6 |
| hypothetical protein | D5071_20860 | Not Available | Positive | 4581747 - 4581917 | 6254.68 |
| hypothetical protein | D5071_20865 | Not Available | Negative | 4582073 - 4582360 | 10122.4 |
| sulp family inorganic anion transporter | D5071_20870 | Not Available | Positive | 4582314 - 4583813 | 53038.2 |
| mandelate racemase/muconate lactonizing enzyme family protein | D5071_20875 | Not Available | Positive | 4583925 - 4585106 | 43289.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Soft rot | Causes | PMC11149725 |
| Potato blackleg | Causes | PMC11677604 |
| Potato soft rot | Causes | PMC5376619 |
